miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Daphnia pulex, Daphnia magna



ABOUT THIS RECORD

ID: MNEST008586
species: Daphnia pulex
miRNA family: miR-2452
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGCTGTTTGTTTTCCTTTCG

miRNA*
 ATGGAAAGCAAAAACACTG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 CTCATTCCGGCGATGGAAAGCAAAAACACTGCCAAAGCAGATTGCGGATGTGATCCTTACCTTCTATCCTTAGTGGAAACCAATCAGGGACAAGAAAGTA
CAGTAAGGAAATCGAGTAAAACTGGTCTTTTACTGGCGTCCCTCACTGGAGGTGCCGCTATTATTTTAAGTGCTGTTTGTTTTCCTTTCGTTTCCCCTG

dot-bracket secondary structure
........(((((.((((((((((..((((...((((..(((.((.(((....(((((((.((((.(((((..(((...)))...)))))..))))....
..))))))).))).(((((((......)))))))((((..((((....)))))))))).))).)))).))))...))))))))))..))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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