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Species belonging to selected taxon:

Daphnia pulex, Daphnia magna



ABOUT THIS RECORD

ID: MNEST008592
species: Daphnia pulex
miRNA family: mir-275
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCAGGTACCTGAAGTAGCGC

miRNA*
 GCTGCGACAGGTGCTTCCGGCT

mismatches: 2
bulges: 2
View larger
pre-miRNA
 TATTACTACTGGCCACTCCCCGTGCTGCGACAGGTGCTTCCGGCTGTGTTAATAACTGCGAGTCAGGTACCTGAAGTAGCGCGCGGAGTGGCTCGGAACG
AT

dot-bracket secondary structure
........(((((((((((.((((((((..(((((((((..((((.(((........))))))))))))))))..)))))))).)))))))).)))....
..


SIMILARITIES
miRBase dpu-mir-275: 3e-47

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-275: 0.00000009		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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