ABOUT THIS RECORDspecies: Daphnia pulex
miRNA family: mir-184
source: miRNEST
Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGACGGAGAACTGATAAGGG miRNA* CTTATCATTCACCAGTCCGGT mismatches: 2 bulges: 2 |
pre-miRNA
ATGACTTGGCCTTATCATTCACCAGTCCGGTTAGATTTTTTGGAAAGTTCCTTTTTCTTGGTTGCACGCAAGATTTAGTTGAACACCCTACTGGACGGAG
AACTGATAAGGGCGTGTCT
dot-bracket secondary structure
..(((.((.(((((((((((.((.(((((((..........((...((((..((.(((((((...)).)))))...))..))))..)).))))))))).)
)).)))))))).)).))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGACTTGGCCTTATCATTCACCAGTCCGGTTAGATTTTTTGGAAAGTTCCTTTTTCTTGGTTGCACGCAAGATTTAGTTGAACACCCTACTGGACGGAG
AACTGATAAGGGCGTGTCT
dot-bracket secondary structure
..(((.((.(((((((((((.((.(((((((..........((...((((..((.(((((((...)).)))))...))..))))..)).))))))))).)
)).)))))))).)).))).
SIMILARITIES| miRBase bmo-mir-184: 0.00000009 PMRD no hits microPC no hits | UniProt no hits RFAM mir-184: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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