miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Daphnia pulex, Artemia franciscana, Daphnia magna



ABOUT THIS RECORD

ID: MNEST008596
species: Daphnia pulex
miRNA family: miR-3526
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAAGATGAAGTTGTTCTTG

miRNA*
 CGAAGAACATCACATTACAGCC

mismatches: 5
bulges: 1
View larger
pre-miRNA
 ATGAGGGAGAAAAAGTACTCCACGAAGAACATCACATTACAGCCGTCCCAGTAGAAGATGAACACCACCATGTCCATTTGGTCCCAGTTGAAGATGAAGT
TGTTCTTGAAGACTCTCCAGTTCCAGT

dot-bracket secondary structure
.....(((((....((.((.((.(((.(((.(((..((.((((...((.(((.((..(((........))).)).))).)).....))))))..))).))
).))).)).))))))))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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