ABOUT THIS RECORDspecies: Nasonia vitripennis
miRNA family: miR-4194
source: miRNEST
Taxonomy by NCBI:
Nasonia vitripennis Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTTATATATGTGTGTGTGTG miRNA* CGCATTTACAAATACAACGTG mismatches: 4 bulges: 0 |
pre-miRNA
TAAACTGCGACTGTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAAAAGAAGAAAAAAAACAAAGAAACGAATAGACTTCAACCATCTGCTGA
AAGGTGATATAGCAATCGGAAAGCACGCGTCTCCTCACATAGCATGTACACGCATTTACAAATACAACGTGCGAGAAAA
dot-bracket secondary structure
.....((((...(((.(((.((((.(((((((((((((((.((((((.((((...((((........................)))).......(((((.
.........))))).))))...)))))).......)))))).....))))))))).)))).))).))).))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAAACTGCGACTGTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAAAAGAAGAAAAAAAACAAAGAAACGAATAGACTTCAACCATCTGCTGA
AAGGTGATATAGCAATCGGAAAGCACGCGTCTCCTCACATAGCATGTACACGCATTTACAAATACAACGTGCGAGAAAA
dot-bracket secondary structure
.....((((...(((.(((.((((.(((((((((((((((.((((((.((((...((((........................)))).......(((((.
.........))))).))))...)))))).......)))))).....))))))))).)))).))).))).))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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