ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: miR166m
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAATGTTGGCTGGCTCGAGG miRNA* TCGGACCAGGCTTCATTCCCC mismatches: 2 bulges: 2 |
pre-miRNA
TTTGTTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAAATGAAGGTTCTCACTCACTCACTCATCATATTTTGGGAGATGAAGTAGTAGAACTA
TTAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAATAT
dot-bracket secondary structure
)......((((((((((((..((((((.(((((((((((((.....))).((((((.(((.((((((((.(((.....)))))).)).)))))))))))).
..)))))))))).))).))).)))))))))))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTGTTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAAATGAAGGTTCTCACTCACTCACTCATCATATTTTGGGAGATGAAGTAGTAGAACTA
TTAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAATAT
dot-bracket secondary structure
)......((((((((((((..((((((.(((((((((((((.....))).((((((.(((.((((((((.(((.....)))))).)).)))))))))))).
..)))))))))).))).))).)))))))))))).....
SIMILARITIES| miRBase ptc-MIR166f: 5.0E-13 PMRD ptc-miR166f: 5.0E-13 microPC miR166: 5.0E-13 | UniProt no hits RFAM 6mir-166: 3.0E-11 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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