ABOUT THIS RECORDspecies: Nasonia vitripennis
miRNA family: let-7
source: miRNEST
Taxonomy by NCBI:
Nasonia vitripennis Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGGTTGTATAGT miRNA* TGTACAACTTGCTAACTTTCC mismatches: 2 bulges: 0 |
pre-miRNA
AAAATAGCGGCGACGCCTGGGTGAGGTAGTAGGTTGTATAGTGGGGAATGAAAATTCGTCATTATGGAATCCACTGTACAACTTGCTAACTTTCCCGGTT
GTCGGCGCCTCGG
dot-bracket secondary structure
......(((.(((((.(((((.(((.(((((((((((((((((((.(((((.......)))))......))))))))))))))))))).))).))))).)
)))).))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAATAGCGGCGACGCCTGGGTGAGGTAGTAGGTTGTATAGTGGGGAATGAAAATTCGTCATTATGGAATCCACTGTACAACTTGCTAACTTTCCCGGTT
GTCGGCGCCTCGG
dot-bracket secondary structure
......(((.(((((.(((((.(((.(((((((((((((((((((.(((((.......)))))......))))))))))))))))))).))).))))).)
)))).))).....
SIMILARITIES| miRBase nvi-let-7: 2e-51 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 2e-40 | most similar mature miRNAs |
Identical with: nvi-let-7 from miRBase (MNEST037629) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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