miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Petromyzon marinus



ABOUT THIS RECORD

ID: MNEST008700
species: Petromyzon marinus
miRNA family: miR-2021
source: miRNEST

Taxonomy by NCBI:
Petromyzon marinus Petromyzon Petromyzontidae Petromyzontiformes Hyperoartia Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGTGGTCGGTGTTTCTTGGA

miRNA*
TCATTAAACCCGGCTGCTTCC

mismatches: 3
bulges: 2

View larger
pre-miRNA
ATCTTTGTTTTCTCATTAAACCCGGCTGCTTCCAGATGGCCCCTTGCCAGGGTGGAATTCCTGTTTCTCCGCGCTGCGAGAGAGACAAAGGTGGTCGGTG
TTTCTTGGA
GTATTGTTT


dot-bracket secondary structure
......((.(((.((..(((((((((((((((((..((((.....))))...)))).....(((((((((((...))).))))))))..))))))))).)
)))..))))
).)).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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