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Species belonging to selected taxon:

Oreochromis niloticus



ABOUT THIS RECORD

ID: MNEST008718
species: Oreochromis niloticus
miRNA family: miR-466h
source: miRNEST

Taxonomy by NCBI:
Oreochromis niloticus Oreochromis Tilapiini Pseudocrenilabrinae African cichlids Cichlidae Labroidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACACACGCACACACACACAA

miRNA*
GTCTGTCACAGCGGTGTGTG

mismatches: 5
bulges: 1

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pre-miRNA
ACACACACACACACACACGCACACACACACAAAGTCCTCTGTAAGCATTTCTATTACAGTGTTGTCTGTCACAGCGGTGTGTGAGGGGAGC

dot-bracket secondary structure
.........(((((((.(((....(((.((((......((((((.........))))))..)))).)))....))))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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