ABOUT THIS RECORD

ID: MNEST008729
species: Oreochromis niloticus
miRNA family: mir-10
source: miRNEST

Taxonomy by NCBI:
Oreochromis niloticus Oreochromis Tilapiini Pseudocrenilabrinae African cichlids Cichlidae Labroidei Perciformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TCAGTTAATGTCTTCTATATCTACCCTGTAGATCCGGATTTGTGTAAAAATCATTAATACAATCACAAATTCGCTTCTAGGGGAGTATATAGTGGATTTA
CACA

dot-bracket secondary structure
...((....((((.((((((((.((((.((((..((((((((((...................))))))))))..)))))))))).)))))).))))..)
)...


SIMILARITIES

miRBase fru-mir-10c: 2e-42 PMRD no hits microPC no hits

UniProt no hits RFAM mir-10: 5e-31

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record