ABOUT THIS RECORDspecies: Molgula tectiformis
miRNA family: mir-239
source: miRNEST
Taxonomy by NCBI:
Molgula tectiformis Molgula Molgulidae Stolidobranchia Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTAATACACAAAAGTGCA miRNA* TACAATGTGATTTACCAAGA mismatches: 5 bulges: 1 |
pre-miRNA
GTCCTGGGTCAGATTTGAAACTTTGTAATACACAAAAGTGCATTGATGATGTACAATGTGATTTACCAAGATATAAATCTCCAACAGGC
dot-bracket secondary structure
..((((....(((((((...(((.((((..((((...(((((((...)))))))..))))..)))).)))...)))))))....)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTCCTGGGTCAGATTTGAAACTTTGTAATACACAAAAGTGCATTGATGATGTACAATGTGATTTACCAAGATATAAATCTCCAACAGGC
dot-bracket secondary structure
..((((....(((((((...(((.((((..((((...(((((((...)))))))..))))..)))).)))...)))))))....)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
