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Species belonging to selected taxon:
Alvinella pompejana
,
Helobdella robusta
,
Lumbricus rubellus
,
Tubifex tubifex
ABOUT THIS RECORD
ID:
MNEST008771
species:
Helobdella robusta
miRNA family:
mir-467
source:
miRNEST
Taxonomy by NCBI:
Helobdella robusta
Helobdella
Glossiphoniidae
Rhynchobdellida
Hirudinea
Hirudinida
Clitellata
Annelida
Annelida/Echiura/Pogonophora group
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATACATACACACACATACAA
miRNA*
GTATGTGTGTGTCGTGTGGG
mismatches:
2
bulges:
1
View larger
pre-miRNA
GCGTGTGTGCGTGTGCGTGCAT
GTATGTGTGTGTCGTGTGGG
TGTGTGTACGAATGTACACAAATGTATATTATTTTAGGGAAAACACCGTTATTTTTCA
GAACGTATTATGGCTTATCTGCATATTTTTGAAAGAATTACATTTGGGAAAAGTAATGTTGCATACACACAAA
CATACATACACACACATACAA
ATACAC
ATACGAACAAACA
dot-bracket secondary structure
..((.(((.((((((.(((..(
((((((((((((.(((((..
((((((((..((((((((....)))))))).((((....))))((.(((((((((((.
(((.(((.((((.........))))..(((....))).))).)))..))))))))))).))..))))))))..
)))))..))))))))))))).
.))).)
))))).))).)).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record