ABOUT THIS RECORDspecies: Petrolisthes cinctipes
miRNA family: miR-4282
source: miRNEST
Taxonomy by NCBI:
Petrolisthes cinctipes Petrolisthes Porcellanidae Galatheoidea Anomura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAAATTTGTATCCAGGTTAT miRNA* ACCTGGATACATATTTTGGA mismatches: 2 bulges: 0 |
pre-miRNA
TTGTGAGGTAAACTCGCAATCTAAAATTTGTATCCAGGTTATGCTGAAGTTTCGAATCATTTGACATACTAGTGAACCAATTACAACGCTTATTCTGTTT
CATATTTGCTTAATACTCGATCAGACTATTGGAAAGCAAACCTGGATACATATTTTGGATAGCGAGTGTTCAGTAGT
dot-bracket secondary structure
...((((....((((((.(((((((((.((((((((((((.((((..(((.(((((...)))))...))).((((.....))))..((..((.((((..(
(.................)).)))).)).))...)))))))))))))))).))))))))).)))))).)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGTGAGGTAAACTCGCAATCTAAAATTTGTATCCAGGTTATGCTGAAGTTTCGAATCATTTGACATACTAGTGAACCAATTACAACGCTTATTCTGTTT
CATATTTGCTTAATACTCGATCAGACTATTGGAAAGCAAACCTGGATACATATTTTGGATAGCGAGTGTTCAGTAGT
dot-bracket secondary structure
...((((....((((((.(((((((((.((((((((((((.((((..(((.(((((...)))))...))).((((.....))))..((..((.((((..(
(.................)).)))).)).))...)))))))))))))))).))))))))).)))))).)))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
