miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000888
species: Helianthus tuberosus
miRNA family: miR829
source: miRNEST

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTTGAATCTTTGATTTGTT

miRNA*
 CATGATCGGGGATTCGGGGTCA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 CATTTGTTACACGATTTGNGTATGAGTATGATCATGATCGGGGATTCGGGGTCATGATCATAGTATATGTGCCAATATGAGCTACTGTTCTTTTGATTGT
ATTTGAATCTTTGATTTGTTCGTTTATGAGTTTATACGTGTAATATTCT

dot-bracket secondary structure
....(((((((((((.....(((((..((((....(((((((((((((((((((.((.((((((.(((((....))))).)))).)).))...))))...
.)))))))))))))))...))))))))).....)).)))))))))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record




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