miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aphis gossypii, Aphis gossypii



ABOUT THIS RECORD

ID: MNEST008884
species: Aphis gossypii
miRNA family: mir-3015
source: miRNEST

Taxonomy by NCBI:
Aphis gossypii Aphis Aphis Aphidini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCAGACATTGTAAGAACGGCC

miRNA*
 CCGTTTTTATAATGTCCAGTT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 ATTATAATGATCTTATTATATACAATTAAGGGCCGTTTTTATAATGTCCAGTTAAGTTACAGTTAGGACTAACCAGTAGAATTCTATCAGTTAACAAATA
AAAAATTCTGCTGGTTAGCGTAATCAGACACTAACCAGACATTGTAAGAACGGCCCTAAGTAGATAATTGTTATTGGTTATGGG

dot-bracket secondary structure
..(((((((....)))))))....(((.((((((((((((((((((((..((((.(((...((((...(((((((((((((((.................
...)))))))))))))))..))))..)))..))))..)))))))))))))))))))).)))..((((((......))))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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