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Species belonging to selected taxon:

Ricinus communis



ABOUT THIS RECORD

ID: MNEST008931
species: Ricinus communis
miRNA family: miR160a
source: miRNEST

Taxonomy by NCBI:
Ricinus communis Ricinus Acalypheae Acalyphoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCGTATGAGGAGCCATGCATA

miRNA*
 TGCCTGGCTCCCTGTATGCCA

mismatches: 2
bulges: 0
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pre-miRNA
 TTTTGTATATGCCTGGCTCCCTGTATGCCATTTGCAGAGCCCACCGGAGCATCGATGGCCTCCGTGGATGGCGTATGAGGAGCCATGCATATTCCTA

dot-bracket secondary structure
......((((((.(((((((.((((((((((((((.(((.(((.(((....))).))).))).)))))))))))))).))))))).)))))).....


SIMILARITIES
miRBase vvi-MIR160e: 4e-37

PMRD vvi-miR160f: 4e-37

microPC miR160: 4e-40		UniProt no hits

RFAM mir-160: 3e-35		most similar mature miRNAs

Identical with: miR160 from microPC (MNEST045059)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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