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Species belonging to selected taxon:

Ricinus communis



ABOUT THIS RECORD

ID: MNEST008933
species: Ricinus communis
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Ricinus communis Ricinus Acalypheae Acalyphoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGGATTGAAGGGAGCTCTA

miRNA*
 GAGCTCCTTGAAGTCCAATAG

mismatches: 3
bulges: 0
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pre-miRNA
 GGCTAAAGGAGTGGAGCTCCTTGAAGTCCAATAGAGGATCTTGATGGGTAGATTGAGCTGCTGAGCTATGGATCCCACAGCCCTATAAGCAGAGATTATA
ATTTTGGATAGGCTTGTGGCTTGCATATCTCAGGAGCTTCATTACCTTGTATTAGATCCTTGTTTGGATTGAAGGGAGCTCTACATCTCTCTC

dot-bracket secondary structure
......(((.((((((((((((..(((((((..((((((((((..((((((...(((((.(((((.((((....((((((.(((((...(((((......
.))))).))))).))))))....)))).))))).)))))..))))))..))..))))))))..)))))))..)))))))))))).))).....


SIMILARITIES
miRBase rco-MIR159: 2e-99

PMRD vvi-miR159c: 2e-34

microPC miR159: 1e-94		UniProt no hits

RFAM MIR159: 3e-105		most similar mature miRNAs

Identical with: miR319 from microPC (MNEST044913)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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