miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Ancylostoma caninum, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Strongyloides ratti, Caenorhabditis remanei, Nippostrongylus brasiliensis, Strongyloides stercoralis, Ancylostoma ceylanicum



ABOUT THIS RECORD

ID: MNEST008964
species: Ancylostoma caninum
miRNA family: mir-136
source: miRNEST

Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCATTTGTTTTGATGATG

miRNA*
 TCATCGTCTCAAATGAGTCT

mismatches: 3
bulges: 1
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pre-miRNA
 TTGTGGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTACGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATTT

dot-bracket secondary structure
..((((...((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))..))))..


SIMILARITIES
miRBase oar-mir-136: 5e-46

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-136: 5e-40		most similar mature miRNAs

Identical with: ssc-mir-136 from miRBase (MNEST033988)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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