ABOUT THIS RECORDspecies: Fundulus heteroclitus
miRNA family: miR-2b
source: miRNEST
Taxonomy by NCBI:
Fundulus heteroclitus Fundulus Fundulidae Cyprinodontoidei Cyprinodontiformes Atherinomorpha Smegmamorpha Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCACAGACAATTTTGATGATA miRNA* TCATCGAGAGCAACTGGAAT mismatches: 4 bulges: 1 |
pre-miRNA
AGCCTGATGGTATCATCGAGAGCAACTGGAATGAGATCACAGACAATTTTGATGATATGAACCTGA
dot-bracket secondary structure
.........((((((((((((....(((((......)).)))....))))))))))))........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGCCTGATGGTATCATCGAGAGCAACTGGAATGAGATCACAGACAATTTTGATGATATGAACCTGA
dot-bracket secondary structure
.........((((((((((((....(((((......)).)))....))))))))))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q5RKI1|IF4A2_RAT: 0.00002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
