ABOUT THIS RECORDspecies: Halocynthia roretzi
miRNA family: miR-153
source: miRNEST
Taxonomy by NCBI:
Halocynthia roretzi Halocynthia Pyuridae Stolidobranchia Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTGTGATGTTGCAGCTGTAC miRNA* ATTGTTGCAGGATTATAAGCA mismatches: 5 bulges: 0 |
pre-miRNA
AGTTGGCAAACATTGTGATGTTGCAGCTGTACATTCATACAGAAGAGATTGTTGCAGGATTATAAGCATTGTAAAT
dot-bracket secondary structure
.....((((...(((((((.(((((((.((...(((.....)))...)).))))))).)))))))...))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGTTGGCAAACATTGTGATGTTGCAGCTGTACATTCATACAGAAGAGATTGTTGCAGGATTATAAGCATTGTAAAT
dot-bracket secondary structure
.....((((...(((((((.(((((((.((...(((.....)))...)).))))))).)))))))...))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
