ABOUT THIS RECORDspecies: Halocynthia roretzi
miRNA family: miR-3612
source: miRNEST
Taxonomy by NCBI:
Halocynthia roretzi Halocynthia Pyuridae Stolidobranchia Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAGGGATCTTGAGAAATGT miRNA* ATGTTTCAATTCTCTATGTA mismatches: 5 bulges: 1 |
pre-miRNA
TGGTTACTACGGTGGGAAACAATGAGGGATCTTGAGAAATGTTTTACTCTCATGAATATAATGGGAGGATTTTGGAATATGTTTCAATTCTCTATGTAAT
CACTGACAATGCTAAG
dot-bracket secondary structure
((((.....((((((...(((...(((((..((((((.(((((((((((((((.......))))))).....)))))))).)))))).))))).)))..)
))))).....))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TGGTTACTACGGTGGGAAACAATGAGGGATCTTGAGAAATGTTTTACTCTCATGAATATAATGGGAGGATTTTGGAATATGTTTCAATTCTCTATGTAAT
CACTGACAATGCTAAG
dot-bracket secondary structure
((((.....((((((...(((...(((((..((((((.(((((((((((((((.......))))))).....)))))))).)))))).))))).)))..)
))))).....))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
