miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Crassostrea gigas, Biomphalaria glabrata, Mytilus californianus, Euprymna scolopes, Lymnaea stagnalis

ABOUT THIS RECORD

ID: MNEST009074
species: Crassostrea gigas
miRNA family: miR-2407
source: miRNEST

Taxonomy by NCBI:
Crassostrea gigas Crassostrea Ostreidae Ostreoidea Ostreoida Pteriomorphia Bivalvia Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
CTGGGCGTATGGGAAGGGCAC

miRNA*
AGTCATTTTACATACTATTAGGA

mismatches: 3
bulges: 2

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pre-miRNA
TCCATTTCCGGTAGTCATTTTACATACTATTAGGACCTATATCACTGGGCGTATGGGAAGGGCACCAACCATAT

dot-bracket secondary structure
.........(((.(((.((((.(((((..((((((......)).))))..))))).))))))))))........

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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