miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Crassostrea gigas, Biomphalaria glabrata, Mytilus californianus, Euprymna scolopes, Lymnaea stagnalis

ABOUT THIS RECORD

ID: MNEST009120
species: Biomphalaria glabrata
miRNA family: miR-219
source: miRNEST

Taxonomy by NCBI:
Biomphalaria glabrata Biomphalaria Planorbidae Lymnaeoidea Basommatophora Pulmonata Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AGAGTTGTTGATGGACATCAC

miRNA*
CAAGTTCATTGACGGCTCTAG

mismatches: 5
bulges: 0

View larger

pre-miRNA
AGTTTATATAGAGAGTTGTTGATGGACATCACTGCAAGTTCATTGACGGCTCTAGTCTGTAAA

dot-bracket secondary structure
......(((((((((((((((((((((..........)))))))))))))))...))))))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record