miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aplysia californica, Lottia gigantea, Crassostrea gigas, Biomphalaria glabrata, Mytilus californianus, Euprymna scolopes, Lymnaea stagnalis



ABOUT THIS RECORD

ID: MNEST009122
species: Biomphalaria glabrata
miRNA family: mir-34
source: miRNEST

Taxonomy by NCBI:
Biomphalaria glabrata Biomphalaria Planorbidae Lymnaeoidea Basommatophora Pulmonata Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGCAGTGTGGTTAGCTGGT

miRNA*
 CACTCTCCACATTACCGCC

mismatches: 3
bulges: 1
View larger
pre-miRNA
 TTAGTCTGTATCAAGCAGTCCCTGATTTTTTGGCAGTGTGGTTAGCTGGTTGTTTCTCCTGCAACAACCACTCTCCACATTACCGCCAAATCAGCCGACC
ATGCACCAGATAAT

dot-bracket secondary structure
...(((((......((((((.(((((((..(((.(((((((..((.((((((((........))))))))))..))))))).)))..)))))))..))).
.)))..)))))...


SIMILARITIES
miRBase dan-mir-34: 0.0000004

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-449: 0.000006		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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