ABOUT THIS RECORDspecies: Biomphalaria glabrata
miRNA family: mir-34
source: miRNEST
Taxonomy by NCBI:
Biomphalaria glabrata Biomphalaria Planorbidae Lymnaeoidea Basommatophora Pulmonata Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCAGTGTGGTTAGCTGGT miRNA* CACTCTCCACATTACCGCC mismatches: 3 bulges: 1 |
pre-miRNA
TTAGTCTGTATCAAGCAGTCCCTGATTTTTTGGCAGTGTGGTTAGCTGGTTGTTTCTCCTGCAACAACCACTCTCCACATTACCGCCAAATCAGCCGACC
ATGCACCAGATAAT
dot-bracket secondary structure
...(((((......((((((.(((((((..(((.(((((((..((.((((((((........))))))))))..))))))).)))..)))))))..))).
.)))..)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAGTCTGTATCAAGCAGTCCCTGATTTTTTGGCAGTGTGGTTAGCTGGTTGTTTCTCCTGCAACAACCACTCTCCACATTACCGCCAAATCAGCCGACC
ATGCACCAGATAAT
dot-bracket secondary structure
...(((((......((((((.(((((((..(((.(((((((..((.((((((((........))))))))))..))))))).)))..)))))))..))).
.)))..)))))...
SIMILARITIES| miRBase dan-mir-34: 0.0000004 PMRD no hits microPC no hits | UniProt no hits RFAM mir-449: 0.000006 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
