ABOUT THIS RECORDspecies: Heterorhabditis bacteriophora
miRNA family: miR-1719
source: miRNEST
Taxonomy by NCBI:
Heterorhabditis bacteriophora Heterorhabditis Heterorhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTGATGATGAGTTGCTGATC miRNA* TCGAACGAGTCATTACTTC mismatches: 3 bulges: 2 |
pre-miRNA
CATGCCCATTTAATTAGAACGAGTGATGATGAGTTGCTGATCGGCCATCGAACGAGTCATTACTTCCTTCTCGAGTATCCTATT
dot-bracket secondary structure
...............((((.((((((((((..(((..((((.....)))))))..))))))))))..)))).............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CATGCCCATTTAATTAGAACGAGTGATGATGAGTTGCTGATCGGCCATCGAACGAGTCATTACTTCCTTCTCGAGTATCCTATT
dot-bracket secondary structure
...............((((.((((((((((..(((..((((.....)))))))..))))))))))..)))).............
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
