ABOUT THIS RECORDspecies: Locusta migratoria
miRNA family: mir-363
source: miRNEST
Taxonomy by NCBI:
Locusta migratoria Locusta Oedipodinae Acrididae Acridoidea Acridomorpha Caelifera Orthoptera Orthopteroidea Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATTCCACGGAATCCATCTGG miRNA* AGATGAGATTAGTGGAGAGCT mismatches: 3 bulges: 2 |
pre-miRNA
TGTGGGAATGCCAGATGAGATTAGTGGAGAGCTGCCAAAGGCATTCATCGTACTGAAGTCGGAGCAGAAGTTGACAGCCGAGGCTGTCGAAGAACATGTA
ACACCCAGAGTCGCACGGTATAAACGCCTCGCTGGTGGTATAGAATTTGTCAGCGAAATTCCACGGAATCCATCTGGTAAAGTACT
dot-bracket secondary structure
........(((((((((.((((.((((((.((((.((((....(((.((((..(((..((((.(((....((((((((....))))))))......))).
....)).)).))).))))((((..((((.....)))).))))))))))).))))....))))))..))))))))))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
TGTGGGAATGCCAGATGAGATTAGTGGAGAGCTGCCAAAGGCATTCATCGTACTGAAGTCGGAGCAGAAGTTGACAGCCGAGGCTGTCGAAGAACATGTA
ACACCCAGAGTCGCACGGTATAAACGCCTCGCTGGTGGTATAGAATTTGTCAGCGAAATTCCACGGAATCCATCTGGTAAAGTACT
dot-bracket secondary structure
........(((((((((.((((.((((((.((((.((((....(((.((((..(((..((((.(((....((((((((....))))))))......))).
....)).)).))).))))((((..((((.....)))).))))))))))).))))....))))))..))))))))))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P13129|LUCI_LUCCR: 0.000000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
