ABOUT THIS RECORDspecies: Phlebotomus papatasi
miRNA family: miR-3126
source: miRNEST
Taxonomy by NCBI:
Phlebotomus papatasi Phlebotomus Phlebotomus Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGGGACAGATGCCCGAAGG miRNA* CCGGGCAGTTTGTCTACTGC mismatches: 4 bulges: 2 |
pre-miRNA
AGGGCATGTACACCGGGCAGTTTGTCTACTGCGGTCGCAAGGCCAATTTGCAGATTGGCAATGTGATGCCTGTGGGACAGATGCCCGAAGGTACCATTGT
dot-bracket secondary structure
...(((.((((..((((((.(((((((((.(((.(((((..(((((((....)))))))..))))))))..)).)))))))))))))...))))...)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGGGCATGTACACCGGGCAGTTTGTCTACTGCGGTCGCAAGGCCAATTTGCAGATTGGCAATGTGATGCCTGTGGGACAGATGCCCGAAGGTACCATTGT
dot-bracket secondary structure
...(((.((((..((((((.(((((((((.(((.(((((..(((((((....)))))))..))))))))..)).)))))))))))))...))))...)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9V3G1|RL8_DROME: 0.0000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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