ABOUT THIS RECORDspecies: Ursus americanus
miRNA family: miR-3654
source: miRNEST
Taxonomy by NCBI:
Ursus americanus Ursus Ursidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GACTGGACAAGCTGCGGAGCT miRNA* CTAAGGCAGCTCGTCTGGTCCG mismatches: 3 bulges: 1 |
pre-miRNA
CTCTTGGCGAAGACTGGACAAGCTGCGGAGCTTGGAGGACTCCTGAAGTATGTGCGACCCTTCTTGAATTCCATCAGCAAGGCTAAGGCAGCTCGTCTGG
TCCGATCTCTTC
dot-bracket secondary structure
.....((.((.((((((((.((((((..(((((.(((((.((..((((...((...)).))))..))..))).))....)))))...)))))).))))))
))...)).))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCTTGGCGAAGACTGGACAAGCTGCGGAGCTTGGAGGACTCCTGAAGTATGTGCGACCCTTCTTGAATTCCATCAGCAAGGCTAAGGCAGCTCGTCTGG
TCCGATCTCTTC
dot-bracket secondary structure
.....((.((.((((((((.((((((..(((((.(((((.((..((((...((...)).))))..))..))).))....)))))...)))))).))))))
))...)).))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q8BG32|PSD11_MOUSE: 0.000000000001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
