ABOUT THIS RECORDspecies: Drosophila auraria
miRNA family: miR-4048
source: miRNEST
Taxonomy by NCBI:
Drosophila auraria montium subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCACATTGGTCAGCATTATTT miRNA* AAGATGCTCTTGGATGGCCA mismatches: 5 bulges: 1 |
pre-miRNA
TTAAAGTTAGAGAAGATGCTCTTGGATGGCCATTGAAAACTTGTGATAGTTTCGCTCATTCCATTGCACATTGGTCAGCATTATTTCCAGCGCCT
dot-bracket secondary structure
.....(((.((((.((((((....((((((.((.(((.....((((.....))))...))).)).)).))))....)))))).)))).)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAAAGTTAGAGAAGATGCTCTTGGATGGCCATTGAAAACTTGTGATAGTTTCGCTCATTCCATTGCACATTGGTCAGCATTATTTCCAGCGCCT
dot-bracket secondary structure
.....(((.((((.((((((....((((((.((.(((.....((((.....))))...))).)).)).))))....)))))).)))).)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
