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Species belonging to selected taxon:
Pristionchus pacificus
ABOUT THIS RECORD
ID:
MNEST009241
species:
Pristionchus pacificus
miRNA family:
miR-2463
source:
miRNEST
Taxonomy by NCBI:
Pristionchus pacificus
Pristionchus
Neodiplogasteridae
Diplogasterida
Chromadorea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTCACGTGGTGGAAATGTCG
miRNA*
TCATTTCCTCCCCGAGAAGAT
mismatches:
4
bulges:
0
View larger
pre-miRNA
AGAGAAAGGGT
CTTCACGTGGTGGAAATGTCG
CCGTCTCG
TCATTTCCTCCCCGAGAAGAT
CGCATCGC
dot-bracket secondary structure
........(((
((((.((.((.(((((((.((
......))
.))))))).)).)).))))))
).......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q93425|RT05_CAEEL: 0.0004
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record