ABOUT THIS RECORDspecies: Pristionchus pacificus
miRNA family: miR-957
source: miRNEST
Taxonomy by NCBI:
Pristionchus pacificus Pristionchus Neodiplogasteridae Diplogasterida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTAGTTGTCGACGTGGTTTC miRNA* GAAATGTTGATGGACAGGAT mismatches: 3 bulges: 1 |
pre-miRNA
CCCGCGTTCATCTTAGTTGTCGACGTGGTTTCATATGCAGAATGAGAATGGGAAATGTTGATGGACAGGATAGATTGAG
dot-bracket secondary structure
.....(((.(((((..((((((((((..((((((...((...))...)))))).))))))))))..))))).)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CCCGCGTTCATCTTAGTTGTCGACGTGGTTTCATATGCAGAATGAGAATGGGAAATGTTGATGGACAGGATAGATTGAG
dot-bracket secondary structure
.....(((.(((((..((((((((((..((((((...((...))...)))))).))))))))))..))))).)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
