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Species belonging to selected taxon:
Acyrthosiphon pisum
,
Aphis gossypii
,
Nilaparvata lugens
,
Myzus persicae
,
Peregrinus maidis
,
Rhodnius prolixus
ABOUT THIS RECORD
ID:
MNEST009248
species:
Nilaparvata lugens
miRNA family:
miR-4003a
source:
miRNEST
Taxonomy by NCBI:
Nilaparvata lugens
Nilaparvata
Delphacinae
Delphacidae
Fulgoroidea
Archaeorrhyncha
Neohemiptera
Euhemiptera
Hemiptera
Paraneoptera
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGTCGGTTATTTAATCTTT
miRNA*
AGATGAGGTTTTTGAACTCACA
mismatches:
3
bulges:
1
View larger
pre-miRNA
GTAGTATATTA
TGAGTCGGTTATTTAATCTTT
TTTGCAAA
AGATGAGGTTTTTGAACTCACA
CAAAAATT
dot-bracket secondary structure
...........
((((((((..((((.((((((
(....)))
)))).))))..))).)))))..
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record