miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acyrthosiphon pisum, Aphis gossypii, Nilaparvata lugens, Myzus persicae, Peregrinus maidis, Rhodnius prolixus



ABOUT THIS RECORD

ID: MNEST009249
species: Nilaparvata lugens
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Nilaparvata lugens Nilaparvata Delphacinae Delphacidae Fulgoroidea Archaeorrhyncha Neohemiptera Euhemiptera Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTTGTGTTGTTGTTTGTTTTT

miRNA*
 ATGGCCAGCAGCAACGCAGAGA

mismatches: 3
bulges: 1
View larger
pre-miRNA
 TATTGTATGTCGTTGTGTTGTTGTTTGTTTTTTCTATATAATTTAATGGTTCAATGGAGATATTAGCAAATAGAAATACTCAGAGAATTGTGAACGATAA
TACGCAACTACTTGTATCTCCTGCCAAGGTTATCGTTTGATTGTGGAGAAGATGGCCAGCAGCAACGCAGAGAAACCAGCT

dot-bracket secondary structure
.........((.(((((((((((((.(((.(((((.(((((((..(((((((....(((.((((..........)))))))...)))))))(((((((((
(..(((...............)))....))))))))))))))))).)))))..))).))))))))))))).))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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