ABOUT THIS RECORDspecies: Equus caballus
miRNA family: miR-516a
source: miRNEST
Taxonomy by NCBI:
Equus caballus Equus subg. Equus Equus Equidae Perissodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCTTCATTTCAGAGAGTGGA miRNA* AATTTTTTGGAACTTGAGACTTT mismatches: 4 bulges: 2 |
pre-miRNA
CATAGTTTTACAGCTTCATTTCAGAGAGTGGATTATTAATTTTTTGGAACTTGAGACTTTAAAAAAAA
dot-bracket secondary structure
.....(((((.((.(((((((((((((((.........)))))))))))..)))).)).)))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CATAGTTTTACAGCTTCATTTCAGAGAGTGGATTATTAATTTTTTGGAACTTGAGACTTTAAAAAAAA
dot-bracket secondary structure
.....(((((.((.(((((((((((((((.........)))))))))))..)))).)).)))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
