ABOUT THIS RECORDspecies: Equus caballus
miRNA family: miR-1777a
source: miRNEST
Taxonomy by NCBI:
Equus caballus Equus subg. Equus Equus Equidae Perissodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGGCGGTGGGGGACGGGA miRNA* CTGAGCCATGCCGTTTTTACC mismatches: 2 bulges: 2 |
pre-miRNA
CGGTGGTGGCGGCGGCGGCGGTGGAGGCGGTGGGGGACGGGAGCGTGACCGGAGGCGGTCGAGAGATCGTGAAAGATCTGGGCGATTCTGAGCCATGCCG
TTTTTACCGTATGTCTGCTAGAAAGT
dot-bracket secondary structure
......((((((((...(((((((((((((((..((.(((((.(((..(((((.((((((....))))))......)))))))).)))))..)).)))))
)))))))))).)).))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CGGTGGTGGCGGCGGCGGCGGTGGAGGCGGTGGGGGACGGGAGCGTGACCGGAGGCGGTCGAGAGATCGTGAAAGATCTGGGCGATTCTGAGCCATGCCG
TTTTTACCGTATGTCTGCTAGAAAGT
dot-bracket secondary structure
......((((((((...(((((((((((((((..((.(((((.(((..(((((.((((((....))))))......)))))))).)))))..)).)))))
)))))))))).)).))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
