ABOUT THIS RECORDspecies: Osmerus mordax
miRNA family: mir-194
source: miRNEST
Taxonomy by NCBI:
Osmerus mordax Osmerus Osmerini Osmerinae Osmeridae Osmeroidea Osmeroidei Osmeriformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCAGTGGAGATGCTGTTACCT miRNA* TGTAACAGCAACTCCATGTGGAA mismatches: 2 bulges: 2 |
pre-miRNA
GACTAACTGGTGCTCTCTGGGTGTAACAGCAACTCCATGTGGAAGATGCCTCTGTTCCAGTGGAGATGCTGTTACCTGCAGAGGGTCAACACAAG
dot-bracket secondary structure
.(((....)))((((((((((.(((((((((.((((((..((((((....)))..))).)))))).))))))))))).)))))))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GACTAACTGGTGCTCTCTGGGTGTAACAGCAACTCCATGTGGAAGATGCCTCTGTTCCAGTGGAGATGCTGTTACCTGCAGAGGGTCAACACAAG
dot-bracket secondary structure
.(((....)))((((((((((.(((((((((.((((((..((((((....)))..))).)))))).))))))))))).)))))))).........
SIMILARITIES| miRBase fru-mir-194: 0.0000000003 PMRD no hits microPC no hits | UniProt no hits RFAM mir-194: 4e-19 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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