ABOUT THIS RECORDspecies: Osmerus mordax
miRNA family: miR-34a
source: miRNEST
Taxonomy by NCBI:
Osmerus mordax Osmerus Osmerini Osmerinae Osmeridae Osmeroidea Osmeroidei Osmeriformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAATCAGCAAGTATACTGCCG miRNA* GCAGTGTCTTAGCTGGTTGTT mismatches: 0 bulges: 2 |
pre-miRNA
AGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTC
dot-bracket secondary structure
.....((((.((((((((((((.((((((((((.......((....))..))))))))))))).))))))))).))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTC
dot-bracket secondary structure
.....((((.((((((((((((.((((((((((.......((....))..))))))))))))).))))))))).))))....
SIMILARITIES| miRBase dre-mir-34: 6e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-34: 4e-37 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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