miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Salmo salar, Oncorhynchus mykiss, Osmerus mordax, Oncorhynchus tshawytscha, Oncorhynchus nerka, Thymallus thymallus, Coregonus clupeaformis, Salvelinus fontinalis



ABOUT THIS RECORD

ID: MNEST009289
species: Osmerus mordax
miRNA family: mir-34
source: miRNEST

Taxonomy by NCBI:
Osmerus mordax Osmerus Osmerini Osmerinae Osmeridae Osmeroidea Osmeroidei Osmeriformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGCAGTGTCTTAGCTGGTTG

miRNA*
 ATCAGCAAGTATACTGCCGCA

mismatches: 0
bulges: 2
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pre-miRNA
 GAGTGGTTCTCTGGCAGTGTCTTAGCTGGTTGTTGTGAGGAGTGAGAACGAAGCAATCAGCAAGTATACTGCCGCAGAAACTCT

dot-bracket secondary structure
((((..((((.((((((((((((.((((((((((.......((....))..))))))))))))).))))))))).)))))))).


SIMILARITIES
miRBase dre-mir-34: 1e-39

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-34: 1e-37		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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