ABOUT THIS RECORDspecies: Osmerus mordax
miRNA family: miR-4166
source: miRNEST
Taxonomy by NCBI:
Osmerus mordax Osmerus Osmerini Osmerinae Osmeridae Osmeroidea Osmeroidei Osmeriformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGGAAAACATTAAATGCACA miRNA* TGTTATTTATTGATTCTTGGC mismatches: 2 bulges: 2 |
pre-miRNA
ATAAACATTGTGTTATTTATTGATTCTTGGCTACATTTTCTAATAGAGATATTGTTTATAATTGGGTTGACACCAGCTCTTAGCAATTATGTAAATTGGG
AAAACATTAAATGCACACCTGATAACA
dot-bracket secondary structure
........(((((.(((((.((.(((((((.((((((((((...))))).((((((.......((((((....))))))..)))))).)))))..)))))
))..)).))))))))))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATAAACATTGTGTTATTTATTGATTCTTGGCTACATTTTCTAATAGAGATATTGTTTATAATTGGGTTGACACCAGCTCTTAGCAATTATGTAAATTGGG
AAAACATTAAATGCACACCTGATAACA
dot-bracket secondary structure
........(((((.(((((.((.(((((((.((((((((((...))))).((((((.......((((((....))))))..)))))).)))))..)))))
))..)).))))))))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
