miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Xenopus laevis, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Rana catesbeiana, Cynops pyrrhogaster, Ambystoma tigrinum tigrinum, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST009350
species: Macaca nemestrina
miRNA family: mir-1268
source: miRNEST

Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGGCGTGGTGGCGGGCGCCT

miRNA*
 GAGTTCGAGACCAGCCTGGC

mismatches: 3
bulges: 1
View larger
pre-miRNA
 ACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACACAGCGAAATCCCACCTCTACTGAAAATACAAAAGTTAGCCAGGCGTGGTGGCGGGCGCCTGTA
ATCCCA

dot-bracket secondary structure
......((.((((.(((((..(((((((((((.(((..................................))).))))))).))))..))))).))))..
..))..


SIMILARITIES
miRBase hsa-mir-5096: 0.00000000009

PMRD no hits

microPC no hits		UniProt sp|Q96MD7|CI085_HUMAN: 0.0000005

RFAM Metazoa_SRP: 1e-25		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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