miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Pimephales promelas, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST009370
species: Cyprinus carpio
miRNA family: miR-4000a
source: miRNEST

Taxonomy by NCBI:
Cyprinus carpio Cyprinus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGAAACTTGTGTGGAACATGC

miRNA*
 CATGTTTTCAGACAAGTCCAGCA

mismatches: 4
bulges: 2
View larger
pre-miRNA
 CATGTAAAGTGCGAAACTTGTGTGGAACATGCTTTGCCTCGAGCACGTACGAGGGAAGTCATGTTTTCAGACAAGTCCAGCATCTGTCTG

dot-bracket secondary structure
........((((...((((((.(((((((((((((.(((((........))))))))).)))).))))).))))))...)))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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