miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Ictalurus punctatus, Pimephales promelas, Ictalurus furcatus, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST009372
species: Cyprinus carpio
miRNA family: mir-1
source: miRNEST

Taxonomy by NCBI:
Cyprinus carpio Cyprinus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAATGTAATAAAGTATGTG

miRNA*
 AGTACAATATAATGTTTTTTA

mismatches: 5
bulges: 0
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pre-miRNA
 TGTTAAGTACAATATAATGTTTTTTATGTTTGTTTTCTGAGCACCTCAGAAACTAATCAATATTTATGAAATGTAATAAAGTATGTGAA

dot-bracket secondary structure
..(((.((((..(((.(((((((.(((..(((.((((((((...)))))))).)))...))).....))))))).)))..)))).))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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