ABOUT THIS RECORDspecies: Cyprinus carpio
miRNA family: mir-467
source: miRNEST
Taxonomy by NCBI:
Cyprinus carpio Cyprinus Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATAAATACACACACGTATAC miRNA* GTACTGTGTATATCTATGTA mismatches: 2 bulges: 1 |
pre-miRNA
GAACGTTTGTTTACCTGTTTGTGTACTGTGTATATCTATGTATATATAAATACACACACGTATACATCAAGGAAAATGTTAGAT
dot-bracket secondary structure
.(((((((.....(((...((((((((((((.(((.((((....)))).))).))))).)))))))...))).)))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAACGTTTGTTTACCTGTTTGTGTACTGTGTATATCTATGTATATATAAATACACACACGTATACATCAAGGAAAATGTTAGAT
dot-bracket secondary structure
.(((((((.....(((...((((((((((((.(((.((((....)))).))).))))).)))))))...))).)))))))....
SIMILARITIES| miRBase mmu-mir-467g: 0.000004 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
