ABOUT THIS RECORDspecies: Lutzomyia longipalpis
miRNA family: mir-2284
source: miRNEST
Taxonomy by NCBI:
Lutzomyia longipalpis Lutzomyia Lutzomyia Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACACAGTTTATTCGGGTTTTT miRNA* AAATTCGCCATTTTGTGTTC mismatches: 5 bulges: 1 |
pre-miRNA
AAGGCAGTCGAAAAATTCGCCATTTTGTGTTCTTGTTTTTTTTAAAATAATCACACAGTTTATTCGGGTTTTTCGTTGGTTC
dot-bracket secondary structure
..(((...(((((((((((.....((((((..(((((((....)))))))..))))))......)))))))))))...))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGGCAGTCGAAAAATTCGCCATTTTGTGTTCTTGTTTTTTTTAAAATAATCACACAGTTTATTCGGGTTTTTCGTTGGTTC
dot-bracket secondary structure
..(((...(((((((((((.....((((((..(((((((....)))))))..))))))......)))))))))))...))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
