miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Drosophila simulans, Glossina morsitans morsitans, Phlebotomus papatasi, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Lutzomyia longipalpis, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Anopheles stephensi, Haematobia irritans irritans, Polypedilum vanderplanki, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009403
species: Lutzomyia longipalpis
miRNA family: miR-1658
source: miRNEST

Taxonomy by NCBI:
Lutzomyia longipalpis Lutzomyia Lutzomyia Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAGCTGTGGTTGGGTGTTGAT

miRNA*
 TAACACCCAAGATTGGCTTCC

mismatches: 3
bulges: 0
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pre-miRNA
 GAGCGCTATAAGAAGGGTACGGAGCTGTGGTTGGGTGTTGATGCTCTTGGGTTGAATATCTACGAGAAGGATGACAAGTTAACACCCAAGATTGGCTTCC
CCTGGTCCGAGATTCGTA

dot-bracket secondary structure
(((..((......((((...(((((((...((((((((((((.(((.(((((.....))))).)))...........))))))))))))...))))))))
)))......)).)))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|B0WYY2|MOEH_CULQU: 0.000000000000004

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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