ABOUT THIS RECORDspecies: Lutzomyia longipalpis
miRNA family: miR-1658
source: miRNEST
Taxonomy by NCBI:
Lutzomyia longipalpis Lutzomyia Lutzomyia Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGCTGTGGTTGGGTGTTGAT miRNA* TAACACCCAAGATTGGCTTCC mismatches: 3 bulges: 0 |
pre-miRNA
GAGCGCTATAAGAAGGGTACGGAGCTGTGGTTGGGTGTTGATGCTCTTGGGTTGAATATCTACGAGAAGGATGACAAGTTAACACCCAAGATTGGCTTCC
CCTGGTCCGAGATTCGTA
dot-bracket secondary structure
(((..((......((((...(((((((...((((((((((((.(((.(((((.....))))).)))...........))))))))))))...))))))))
)))......)).)))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GAGCGCTATAAGAAGGGTACGGAGCTGTGGTTGGGTGTTGATGCTCTTGGGTTGAATATCTACGAGAAGGATGACAAGTTAACACCCAAGATTGGCTTCC
CCTGGTCCGAGATTCGTA
dot-bracket secondary structure
(((..((......((((...(((((((...((((((((((((.(((.(((((.....))))).)))...........))))))))))))...))))))))
)))......)).)))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|B0WYY2|MOEH_CULQU: 0.000000000000004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
