miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lepeophtheirus salmonis, Caligus rogercresseyi, Caligus clemensi



ABOUT THIS RECORD

ID: MNEST009428
species: Caligus rogercresseyi
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Caligus rogercresseyi Caligus Caligidae Siphonostomatoida Podoplea Neocopepoda Copepoda Maxillopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GATGCTGCTGCTGATTCAGGT

miRNA*
 CAGAGTAGTAGTAGTTTTTCT

mismatches: 2
bulges: 2
View larger
pre-miRNA
 TTCATCGGGAGGATGCTGCTGCTGATTCAGGTATCCATAAAGGTAAACTGGATGGTCATGATGATGATTAACGAATGTATGAATTGAGGACTCCACCAGA
GTAGTAGTAGTTTTTCTTTTATAAA

dot-bracket secondary structure
......(((((((.(((((((((.((((.(((.(((.(((...((.((....(((((((....)))))))......)).))..))).)))....))).))
)))))))))))..))))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;