miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Homarus americanus



ABOUT THIS RECORD

ID: MNEST009443
species: Homarus americanus
miRNA family: miR-4117
source: miRNEST

Taxonomy by NCBI:
Homarus americanus Homarus Nephropidae Nephropoidea Astacidea Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTGAATGTATTGGAGATT

miRNA*
TCTCTGAGCAATGGTTGAATTTT

mismatches: 4
bulges: 2

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pre-miRNA
AAACACAGCTAATCTCTGAGCAATGGTTGAATTTTATTTTAGCAGTTGTGCTGGATGTAGTTCAGTGGACATTTAATTTCATTTGGTTAAAGGCTCCTTT
GTATCAAGTAAAACTTAAAGCAAATCAGTGCACTGTTGTAAATATTGTGTGAATGTATTGGAGATTATTGGCTAG


dot-bracket secondary structure
......(((((((((((((...(((.(((.((..((((((((((((.(((((((.(((.((((...)))).((((((((.(((((((..((((...))))
..))))))).))).))))))))..)))))))))))))).)))))..)).))).))).)))))))))...))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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