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Species belonging to selected taxon:
Litopenaeus vannamei
,
Petrolisthes cinctipes
,
Penaeus monodon
,
Homarus americanus
,
Eriocheir sinensis
,
Carcinus maenas
,
Gammarus pulex
,
Callinectes sapidus
,
Fenneropenaeus chinensis
ABOUT THIS RECORD
ID:
MNEST009450
species:
Homarus americanus
miRNA family:
miR-2800
source:
miRNEST
Taxonomy by NCBI:
Homarus americanus
Homarus
Nephropidae
Nephropoidea
Astacidea
Pleocyemata
Decapoda
Eucarida
Eumalacostraca
Malacostraca
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAATATTGTGTCTTGCAAAT
miRNA*
ATTGCAATATAATATGTTTAAC
mismatches:
3
bulges:
1
View larger
pre-miRNA
AACCGTTTGTT
TGAATATTGTGTCTTGCAAAT
TACTGGCTAAGATTGATTGAAAAAGGATGAT
ATTGCAATATAATATGTTTAAC
TAATTTTC
dot-bracket secondary structure
......(((.(
(((((((..(((.((((((((
((((....................)).))))
.)))))).)))..)))))))).
))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record